π A Survey of Deep Learning Methods in Protein Bioinformatics and its Impact on Protein Design
π Publish year: 2025
π§βπ»Author: Weihang Dai
π’Universities: The Hong Kong University of Science and Technology
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #protein
π Publish year: 2025
π§βπ»Author: Weihang Dai
π’Universities: The Hong Kong University of Science and Technology
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #protein
π8β€2
π Deep learning in microbiome analysis: a comprehensive review of neural network models
π Journal: Frontiers in Microbiology (I.F.=4)
π Publish year: 2025
π§βπ»Authors: Piotr Przymus, Krzysztof Rykaczewski, AdriΓ‘n MartΓn-Segura, ...
π’Universities:
- Nicolaus Copernicus University in ToruΕ & University of Warmia and Mazury in Olsztyn,, Poland
- University of Tartu, Estonia
- University of Cambridge, United Kingdom
- Technical University of Applied Sciences Wildau, Germany
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #microbiome
π Journal: Frontiers in Microbiology (I.F.=4)
π Publish year: 2025
π§βπ»Authors: Piotr Przymus, Krzysztof Rykaczewski, AdriΓ‘n MartΓn-Segura, ...
π’Universities:
- Nicolaus Copernicus University in ToruΕ & University of Warmia and Mazury in Olsztyn,, Poland
- University of Tartu, Estonia
- University of Cambridge, United Kingdom
- Technical University of Applied Sciences Wildau, Germany
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #microbiome
Frontiers
Frontiers | Deep learning in microbiome analysis: a comprehensive review of neural network models
Microbiome research, the study of microbial communities in diverse environments, has seen significant advances due to the integration of deep learning (DL) m...
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π A brief survey of deep learning-based models for CircRNA-protein binding sites prediction
π Journal: Neurocomputing (I.F.=5.5)
π Publish year: 2025
π§βπ»Authors: Zhen Shen, Lin Yuan, Wenzheng Bao , ...
π’Universities: Nanyang Institute of Technology - Qilu University of Technology - Xuzhou University of Technology-Eastern Institute of Technology, China
π Study the paper
π²Channel: @Bioinformatics
#review #dna #deep_learning #circRNA #binding
π Journal: Neurocomputing (I.F.=5.5)
π Publish year: 2025
π§βπ»Authors: Zhen Shen, Lin Yuan, Wenzheng Bao , ...
π’Universities: Nanyang Institute of Technology - Qilu University of Technology - Xuzhou University of Technology-Eastern Institute of Technology, China
π Study the paper
π²Channel: @Bioinformatics
#review #dna #deep_learning #circRNA #binding
π5π2π1
πMultimodal deep learning approaches for precision oncology: a comprehensive review
π Journal: Briefings in Bioinformatics (I.F.=6.8)
π Publish year: 2025
π§βπ»Authors: Huan Yang, Minglei Yang, Jiani Chen, ...
π’Universities: University of Electronic Science and Technology of China - The First Affiliated Hospital of Zhengzhou University, China
π Study the paper
π²Channel: @Bioinformatics
#review #multimodal #deep_learning #oncology
π Journal: Briefings in Bioinformatics (I.F.=6.8)
π Publish year: 2025
π§βπ»Authors: Huan Yang, Minglei Yang, Jiani Chen, ...
π’Universities: University of Electronic Science and Technology of China - The First Affiliated Hospital of Zhengzhou University, China
π Study the paper
π²Channel: @Bioinformatics
#review #multimodal #deep_learning #oncology
β€4
π A comprehensive review of deep learning-based approaches for drugβdrug interaction prediction
πJournal: Briefings in Functional Genomics (I.F.=2.5)
π Publish year: 2025
π§βπ»Authors:Yan Xia, An Xiong, Zilong Zhang, ...
π’Universities: Hainan University & University of Electronic Science and Technology of China, China
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug
πJournal: Briefings in Functional Genomics (I.F.=2.5)
π Publish year: 2025
π§βπ»Authors:Yan Xia, An Xiong, Zilong Zhang, ...
π’Universities: Hainan University & University of Electronic Science and Technology of China, China
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug
β€2π2π2
πΉ Deep Learning for Protein Structure Prediction
π Watch
π₯ Slides & Abstract
π²Channel: @Bioinformatics
#video #deep_learning #protein
π Watch
π₯ Slides & Abstract
π²Channel: @Bioinformatics
#video #deep_learning #protein
YouTube
Deep Learning for Protein Structure Prediction | Iaroslav Geraskin | Conf42 ML 2024
Read the abstract β€ https://www.conf42.com/Machine_Learning_2024_Iaroslav_Geraskin_deep_learning_protein
Other sessions at this event β€ https://www.conf42.com/ml2024
Support our mission β€ https://www.conf42.com/support
Join Discord β€ https://discord.gg/DnyHgrC7jCβ¦
Other sessions at this event β€ https://www.conf42.com/ml2024
Support our mission β€ https://www.conf42.com/support
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π8π1π1
πA review of deep learning models for the prediction of chromatin interactions with DNA and epigenomic profiles
π Journal: Briefings in Bioinformatics (I.F.=6.8)
π Publish year: 2024
π§βπ»Authors: Yunlong Wang , Siyuan Kong , Cong Zhou, ...
π’Universities: Guangdong Laboratory of Lingnan Modern Agriculture & Chinese Academy of Agricultural Sciences, China
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #chromatin #dna #epigenomic
π Journal: Briefings in Bioinformatics (I.F.=6.8)
π Publish year: 2024
π§βπ»Authors: Yunlong Wang , Siyuan Kong , Cong Zhou, ...
π’Universities: Guangdong Laboratory of Lingnan Modern Agriculture & Chinese Academy of Agricultural Sciences, China
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #chromatin #dna #epigenomic
π6β€4π1
π Drug-Target Interaction/Affinity Prediction: Deep Learning Models and Advances Review
π Publish year: 2025
π§βπ»Authors: Ali Vefghi, Zahed Rahmati, Mohammad Akbari
π’Universities: Amirkabir University of Technology, Iran
π Study the paper
π²Channel: @Bioinformatics
#review #drug_target #affinity #deep_learning
π Publish year: 2025
π§βπ»Authors: Ali Vefghi, Zahed Rahmati, Mohammad Akbari
π’Universities: Amirkabir University of Technology, Iran
π Study the paper
π²Channel: @Bioinformatics
#review #drug_target #affinity #deep_learning
β€5π4π1
π Recent advances in deep learning and language models for studying the microbiome
πJournal: Frontiers in Genetics (I.F.=2.8)
π Publish year: 2025
π§βπ»Authors: Binghao Yan, Yunbi Nam, Lingyao Li, ...
π’Universities: University of Pennsylvania, Vanderbilt University Medical Center, University of South Florida, University of Pittsburgh, United States
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #llm #microbiome
πJournal: Frontiers in Genetics (I.F.=2.8)
π Publish year: 2025
π§βπ»Authors: Binghao Yan, Yunbi Nam, Lingyao Li, ...
π’Universities: University of Pennsylvania, Vanderbilt University Medical Center, University of South Florida, University of Pittsburgh, United States
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #llm #microbiome
π3π1
π Cutting edge deep-learning based tools for metagenomic research
πJournal: National Science Review (π₯I.F.=16.3)
π Publish year: 2025
π§βπ»Author: Eli Levy Karin, Martin Steinegger
π’Universities: ELKMO, Copenhagen, Denmark - Seoul National University, South Korea
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #metagenomic #tool
πJournal: National Science Review (π₯I.F.=16.3)
π Publish year: 2025
π§βπ»Author: Eli Levy Karin, Martin Steinegger
π’Universities: ELKMO, Copenhagen, Denmark - Seoul National University, South Korea
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #metagenomic #tool
β€1π1
πΉ AI for Biology
π₯ From MIT & Microsoft
π Watch
π²Channel: @Bioinformatics
#video #ai #biology #deep_learning
π₯ From MIT & Microsoft
π Watch
π²Channel: @Bioinformatics
#video #ai #biology #deep_learning
YouTube
MIT 6.S191 (Microsoft): AI for Biology
MIT Introduction to Deep Learning 6.S191: Lecture 10
AI Optimized for Biology
Lecturer: Ava Amini (Principal Research Scientist)
Microsoft
** New 2025 Edition **
For all lectures, slides, and lab materials: http://introtodeeplearning.comββ
Subscribe toβ¦
AI Optimized for Biology
Lecturer: Ava Amini (Principal Research Scientist)
Microsoft
** New 2025 Edition **
For all lectures, slides, and lab materials: http://introtodeeplearning.comββ
Subscribe toβ¦
π10
π A Comprehensive Review of Deep Learning Applications with Multi-Omics Data in Cancer Research
π Journal: Genes (I.F.=2.8)
πPublish year: 2025
π§βπ»Authors: Flavio Sartori,Francesco CodicΓ¨,Isabella Caranzano, ...
π’Universities: Department of Medical Sciences, University of Torino, Italy
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #cancer #genomics #multi_omics
π Journal: Genes (I.F.=2.8)
πPublish year: 2025
π§βπ»Authors: Flavio Sartori,Francesco CodicΓ¨,Isabella Caranzano, ...
π’Universities: Department of Medical Sciences, University of Torino, Italy
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #cancer #genomics #multi_omics
β€8π2π1π1
π Recent advances in deep learning for protein-protein interaction: a review
π Journal: BioData Mining (I.F.=4)
πPublish year: 2025
π§βπ»Authors: Jiafu Cui, Siqi Yang, Litai Yi, ...
π’Universities: Inner Mongolia University, China
π Study the paper
π²Channel: @Bioinformatics
#review #ppi #deep_learning #protein
π Journal: BioData Mining (I.F.=4)
πPublish year: 2025
π§βπ»Authors: Jiafu Cui, Siqi Yang, Litai Yi, ...
π’Universities: Inner Mongolia University, China
π Study the paper
π²Channel: @Bioinformatics
#review #ppi #deep_learning #protein
π3π₯1
π½ Deep learning in drug discovery
π Watch
π²Channel: @Bioinformatics
#video #deep_learning #drug
π Watch
π²Channel: @Bioinformatics
#video #deep_learning #drug
YouTube
Explaining the βblack boxβ: deep learning in drug discovery
Recent years have seen a remarkable rise in the number and scope of artificial intelligence and machine learning (especially deep learning) algorithms for small molecule discovery. But how can these methods provide new and transformative insights into ourβ¦
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πResearching public health datasets in the era of deep learning: a systematic literature review
π Journal: Health Informatics Journal (I.F.=2.3)
πPublish year: 2025
π§βπ»Authors: Rand Obeidat, Izzat Alsmadi, Qanita Bani Baker, ...
π’Universities:
Bowie State University - Texas A & M San Antonio - , USA
Jordan University of Science and Technology - The University of Jordan, Jordan
π Study the paper
π²Channel: @Bioinformatics
#review #dataset #deep_learning
π Journal: Health Informatics Journal (I.F.=2.3)
πPublish year: 2025
π§βπ»Authors: Rand Obeidat, Izzat Alsmadi, Qanita Bani Baker, ...
π’Universities:
Bowie State University - Texas A & M San Antonio - , USA
Jordan University of Science and Technology - The University of Jordan, Jordan
π Study the paper
π²Channel: @Bioinformatics
#review #dataset #deep_learning
π4β€3
π Future of Breast Cancer Diagnosis: A Review of DL and ML Applications and Emerging Trends for Multimodal Data
π Journal: IEEE Access (I.F.=3.6)
πPublish year: 2025
π§βπ»Authors: Beibit Abdikenov; Tomiris Zhaksylyk; Olzhas Shortanbaiuly
π’University: Astana IT University, Kazakhstan
π Study the paper
π²Channel: @Bioinformatics
#review #breast #cancer #ml #deep_learning #multimodal
π Journal: IEEE Access (I.F.=3.6)
πPublish year: 2025
π§βπ»Authors: Beibit Abdikenov; Tomiris Zhaksylyk; Olzhas Shortanbaiuly
π’University: Astana IT University, Kazakhstan
π Study the paper
π²Channel: @Bioinformatics
#review #breast #cancer #ml #deep_learning #multimodal
π8β€3π1
π A Comprehensive and Systematic Review for Deep Learning-Based De Novo Peptide Sequencing
πPublish year: 2025
π§βπ»Authors: Jun Xia, Jingbo Zhou, Shaorong Chen, ...
π’Universities: The Hong Kong University of Science and Technology (Guangzhou), Westlake University, Tsinghua University, China
π Study the paper
π²Channel: @Bioinformatics
#review #peptide #deep_learning
πPublish year: 2025
π§βπ»Authors: Jun Xia, Jingbo Zhou, Shaorong Chen, ...
π’Universities: The Hong Kong University of Science and Technology (Guangzhou), Westlake University, Tsinghua University, China
π Study the paper
π²Channel: @Bioinformatics
#review #peptide #deep_learning
π3