📃Exploring Chemical Information in PubChem
📘Journal: Current Protocols
🗓Publish year: 2021
💥Basic Protocols investigated:
▫️Finding genes and proteins that interact with a given compound
▫️Finding drug-like compounds similar to a query compound through a two-dimensional (2-D) similarity search
▫️Finding compounds similar to a query compound through a three-dimensional (3-D) similarity search
▫️Computing similarity scores between compounds
▫️Getting the bioactivity data for the hit compounds from substructure search
▫️Finding drugs that target a particular gene
▫️Getting bioactivity data of all chemicals tested against a protein.
▫️Finding compounds annotated with classifications or ontological terms
▫️Finding stereoisomers and isotopomers of a compound through identity search
📎 Study the paper
📲Channel: @Bioinformatics
#database #pubchem
📘Journal: Current Protocols
🗓Publish year: 2021
💥Basic Protocols investigated:
▫️Finding genes and proteins that interact with a given compound
▫️Finding drug-like compounds similar to a query compound through a two-dimensional (2-D) similarity search
▫️Finding compounds similar to a query compound through a three-dimensional (3-D) similarity search
▫️Computing similarity scores between compounds
▫️Getting the bioactivity data for the hit compounds from substructure search
▫️Finding drugs that target a particular gene
▫️Getting bioactivity data of all chemicals tested against a protein.
▫️Finding compounds annotated with classifications or ontological terms
▫️Finding stereoisomers and isotopomers of a compound through identity search
📎 Study the paper
📲Channel: @Bioinformatics
#database #pubchem
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📄The AlphaFold Database of Protein Structures: A Biologist’s Guide
📘Journal: Journal of Molecular Biology (JMB) (I.F.=6.151)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
#protein #database #alphafold
📘Journal: Journal of Molecular Biology (JMB) (I.F.=6.151)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
#protein #database #alphafold
👍6
📃Brief introduction of medical database and data mining technology in big data era
📕Journal: Journal of Evidence-Based Medicine (I.F.=6.224)
🗓Publish year: 2020
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📲Channel: @Bioinformatics
#medical #database #data_minig
📕Journal: Journal of Evidence-Based Medicine (I.F.=6.224)
🗓Publish year: 2020
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📲Channel: @Bioinformatics
#medical #database #data_minig
❤8👍3🔥2
📑 Drug–drug interaction prediction: databases, web servers and computational models
📙 Journal: Briefings in Bioinformatics (I.F.=9.5)
🗓 Publish year: 2024
🧑💻Authors: Yan Zhao, Jun Yin, Li Zhang, Yong Zhang, Xing Chen
🏢Universities: China University of Mining and Technology, and Jiangnan University, China
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📲Channel: @Bioinformatics
#review #drug #database
📙 Journal: Briefings in Bioinformatics (I.F.=9.5)
🗓 Publish year: 2024
🧑💻Authors: Yan Zhao, Jun Yin, Li Zhang, Yong Zhang, Xing Chen
🏢Universities: China University of Mining and Technology, and Jiangnan University, China
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📲Channel: @Bioinformatics
#review #drug #database
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📄 Recent advances in the characterization of essential genes and development of a database of essential genes
📘Journal: iMeta (🔥I.F.=23.7)
🗓Publish year: 2024
🧑💻Authors: Ya-Ting Liang, Hao Luo, Yan Lin, Feng Gao
🏢University: Tianjin University, China
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📲Channel: @Bioinformatics
#review #gene #essentiality #database
📘Journal: iMeta (🔥I.F.=23.7)
🗓Publish year: 2024
🧑💻Authors: Ya-Ting Liang, Hao Luo, Yan Lin, Feng Gao
🏢University: Tianjin University, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #gene #essentiality #database
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