Blackboard Computing Adventures 💡
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Talking of GENETICS Research: Case of Pineapple Genetics meets TRANSFORMATICS!
#geneexpression #geneticcode #research #pineapple #interestingfacts #fieldresearch #nuchwezi
#geneexpression #geneticcode #research #pineapple #interestingfacts #fieldresearch #nuchwezi
Blackboard Computing Adventures 💡
Talking of GENETICS Research: Case of Pineapple Genetics meets TRANSFORMATICS! #geneexpression #geneticcode #research #pineapple #interestingfacts #fieldresearch #nuchwezi
God is our best teacher of Programming I Trust! Seeing as his DNA programming language and the ~Ribena~ Ribosome biological computer in our first cell in life is what eventually produced the entire galaxy that is our current selves! Isn't GENETICS truly humbling?? Details in my upcoming research paper ✓ But meanwhile, be catching up with where TRANSFORMATICS has come from: http://bit.ly/transformatics101thesis
#transformatics #genetics #computerscience #sequenceprocessors #geneticcode #bioautomata #upcoming #research #phd #nuchwezi #jwl #universityofoxford
#transformatics #genetics #computerscience #sequenceprocessors #geneticcode #bioautomata #upcoming #research #phd #nuchwezi #jwl #universityofoxford
Forwarded from UGANDA
So, to paint a clearer picture for some people that don't know how GENETICS is important, realize that the same natural programming language that is used to construct a human being, is the same exact language used to produce a pineapple or even a fish. #genetics101 #StayTuned
UGANDA
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Away from considering the possibility of designing artificial ribosomes or synthetic natural ones, we shall also look at the possibility of extending this fundamentally crucial concept to that of printing ready-to-eat foods as well as non-natural living organisms produced on specification...
# TRANSFORMATICS meets future 3-D Printers that are like RIBOSOMES
#transformatics #genetics #ideas #futuredirections
# TRANSFORMATICS meets future 3-D Printers that are like RIBOSOMES
#transformatics #genetics #ideas #futuredirections
Blackboard Computing Adventures 💡
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Some ideas of mine from years ago have been sitting patiently in the dark, waiting for the right day to see the light of day!
#secrethands #cryptography #occultciphers #nuchweziresearch writing across and between lines!! 🥰🤦🙏🤣🤣
#secrethands #cryptography #occultciphers #nuchweziresearch writing across and between lines!! 🥰🤦🙏🤣🤣
Blackboard Computing Adventures 💡
Away from considering the possibility of designing artificial ribosomes or synthetic natural ones, we shall also look at the possibility of extending this fundamentally crucial concept to that of printing ready-to-eat foods as well as non-natural living organisms…
Guys, officially welcome to AUGUST
#promotions #thecream de la #phds CHECK OUT OUR ORCID/RESEARCH mile-gem rocks: https://orcid.org/0000-0002-0002-4657
Blackboard Computing Adventures 💡
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Among exciting new applications of TEA programming to GENETICS Research:
We see some neat way to transform a DNA sequence to its characteristic statistical summary (a modal sequence statistic)!
Who knows what's coming next...
State-of-the-Art DNA sequencing using TEA on the commandline? #phd #jwl #nuchweziresearch #genetics #transformatics work's still ongoing...
cat theta1_dna.txt | tttt -c "v:vSEQ|v:vANA:{}|u!:|v:vMS|l:lMS|y:vMS|d!:^.|v:vSY|y:vMS |d:^.|v:vMS|y:vSEQ|d*!:vSY|g:|v:|v!:|v:vSYN|g*:{}:vSY:vSYN|x*:vANA|v:vANA|y:vMS|f:^$:lFIN|j:lMS|l:lFIN|y:vANA" → → → C4G3T3A2We see some neat way to transform a DNA sequence to its characteristic statistical summary (a modal sequence statistic)!
Who knows what's coming next...
State-of-the-Art DNA sequencing using TEA on the commandline? #phd #jwl #nuchweziresearch #genetics #transformatics work's still ongoing...
Blackboard Computing Adventures 💡
Among exciting new applications of TEA programming to GENETICS Research: cat theta1_dna.txt | tttt -c "v:vSEQ|v:vANA:{}|u!:|v:vMS|l:lMS|y:vMS|d!:^.|v:vSY|y:vMS |d:^.|v:vMS|y:vSEQ|d*!:vSY|g:|v:|v!:|v:vSYN|g*:{}:vSY:vSYN|x*:vANA|v:vANA|y:vMS|f:^$:lFIN|j:l…
Concerning DNA sequencing, we basically want to elegantly solve the following fundamental problem:
Given any two symbol sequences, S1 and S2, that potentially have overlaps (either common prefix or common suffix) or that have similar subsequences (potentially in the "inside" of either sequence, away from the edges) either once or more and of potentially varying lengths; problem 1: what is the longest common subsequence between S1 and S2? problem 2: how to correctly generate a single resultant/consensus sequence (S1•S2) from both S1 and S2, that preserves their common subsequences and results in the most meaningful compromise subsequences on those regions where the two sequences are dissimilar?
Solving that Problem 👆🏼😉 might totally leave all of GENETICS disrupted, but shall definitely result in solutions to problems in many other fields as well.
----[REFERENCE]:
Teresa Przytycka PhD, NCBI:
https://www.ncbi.xyz/CBBresearch/Przytycka/download/lectures/PCB_Lect10_Whole_Genome.pdf
#brainstorming #idea #problems #genomesequencing #postsanger #genetics #transformatics #sequenceanalysis #phd #jwl #fundamentals
Given any two symbol sequences, S1 and S2, that potentially have overlaps (either common prefix or common suffix) or that have similar subsequences (potentially in the "inside" of either sequence, away from the edges) either once or more and of potentially varying lengths; problem 1: what is the longest common subsequence between S1 and S2? problem 2: how to correctly generate a single resultant/consensus sequence (S1•S2) from both S1 and S2, that preserves their common subsequences and results in the most meaningful compromise subsequences on those regions where the two sequences are dissimilar?
Solving that Problem 👆🏼😉 might totally leave all of GENETICS disrupted, but shall definitely result in solutions to problems in many other fields as well.
----[REFERENCE]:
Teresa Przytycka PhD, NCBI:
https://www.ncbi.xyz/CBBresearch/Przytycka/download/lectures/PCB_Lect10_Whole_Genome.pdf
@misc{przytycka_wgs_lecture10,
author = {Teresa Przytycka},
title = {Lecture 10: Whole Genome Sequencing and Analysis},
year = {2025},
howpublished = {\url{https://www.ncbi.xyz/CBBresearch/Przytycka/download/lectures/PCB_Lect10_Whole_Genome.pdf}},
note = {Accessed August 2, 2025. Lecture slides from Introduction to Computational Biology.}
}#brainstorming #idea #problems #genomesequencing #postsanger #genetics #transformatics #sequenceanalysis #phd #jwl #fundamentals
Blackboard Computing Adventures 💡
Concerning DNA sequencing, we basically want to elegantly solve the following fundamental problem: Given any two symbol sequences, S1 and S2, that potentially have overlaps (either common prefix or common suffix) or that have similar subsequences (potentially…
There's progress being made...
✓ We've defined and Mathematically formalized a Genome Sequencer, The Ribosome (Protein Generator), Gene Expression and more...
Keep waiting for the full research report...
Otherwise, we are rewriting the laws of #molecularbiology and especially #genetics from the ground up.. one step at a time... with clean and provable mathematics definitions, theorems and (yes!) laws!!!
Thanks #transformatics and the team at #nuchweziresearch, bringing modern sequencing theory to life.
Those dealing with animal and plant pathology, those designing machine learning and artificial intelligence using genetic algorithms, those exploring #bioautomata.. hahaha get excited! More details later. #jwl #phd the #foundations
✓ We've defined and Mathematically formalized a Genome Sequencer, The Ribosome (Protein Generator), Gene Expression and more...
Keep waiting for the full research report...
Otherwise, we are rewriting the laws of #molecularbiology and especially #genetics from the ground up.. one step at a time... with clean and provable mathematics definitions, theorems and (yes!) laws!!!
Thanks #transformatics and the team at #nuchweziresearch, bringing modern sequencing theory to life.
Those dealing with animal and plant pathology, those designing machine learning and artificial intelligence using genetic algorithms, those exploring #bioautomata.. hahaha get excited! More details later. #jwl #phd the #foundations