Minimal demo for GMXvg: A tool to plot #GROMACS .xvg files
GMXvg: Utility to Convert/Plot GROMACS XVG files Commandline based #GROMACS #XVG File plotting utility.
β’ Discovers all the XVG files in the current or subdirectories and converts them in specified file formats (default JPG).
β’ Logs the summary of plots in a file to quickly access the plot values along with their standard deviation values.
https://www.youtube.com/watch?v=99Eeqjp_0kI
GMXvg: Utility to Convert/Plot GROMACS XVG files Commandline based #GROMACS #XVG File plotting utility.
β’ Discovers all the XVG files in the current or subdirectories and converts them in specified file formats (default JPG).
β’ Logs the summary of plots in a file to quickly access the plot values along with their standard deviation values.
https://www.youtube.com/watch?v=99Eeqjp_0kI
YouTube
Minimal demo for GMXvg: A tool to plot #GROMACS .xvg files
GMXvg: Utility to Convert/Plot GROMACS XVG files Commandline based #GROMACS #XVG File plotting utility.
β’ Discovers all the XVG files in the current or subdirectories and converts them in specified file formats (default JPG).
β’ Logs the summary of plotsβ¦
β’ Discovers all the XVG files in the current or subdirectories and converts them in specified file formats (default JPG).
β’ Logs the summary of plotsβ¦
π1
Forwarded from π
TheBiomics - CSIR, GATE, ICMR, DBT, TIFR, GRE, GAT-B, IIT (vi @theBiomics)
Dear Scholars,
I am sorry that I cannot do much about DM messages from spammers as we really cannot distinguish if a user is genuine or a spammer. Please recheck the privacy setting of your telegram so that you don't make any sensitive or personal information public or accessible by random people.
Also, requesting you to share any problem you face in our groups or channel to @ScientificReporter, @TheBiomicsAdmin, or @TheBiomicsEditor.
Again sorry that we are helpless at this point as we want to maintain an accessible platform for the aspirants where we can share resources mutually.
ππ½
I am sorry that I cannot do much about DM messages from spammers as we really cannot distinguish if a user is genuine or a spammer. Please recheck the privacy setting of your telegram so that you don't make any sensitive or personal information public or accessible by random people.
Also, requesting you to share any problem you face in our groups or channel to @ScientificReporter, @TheBiomicsAdmin, or @TheBiomicsEditor.
Again sorry that we are helpless at this point as we want to maintain an accessible platform for the aspirants where we can share resources mutually.
ππ½
β€2π1
Hi Dear Members of @TheJournalClub
We are actively developing computational tools to assist research scholars. These tools are free and developed to help you assist in your journey. Just to help you automate your routine jobs.
Here are a few tools developed till now.
1. For bulk plotting of GROMACS XVG files https://github.com/TheBiomics/GMXvg
2. Python Functions to Process Files and Handle Data https://github.com/TheBiomics/UtilityLib
3. To convert images like to 600dpi 1200dpi tiff or JPG format etc https://github.com/TheBiomics/bimbmaan
4. Other web based tools at https://bi0.in/tool (sorry for ads)
We would love to solve any such problem where repetitive work is needed. You can share your problem. We will try to solve your problem through code. Additionally, anyone interested can collaborate with us to take these further.
We are actively developing computational tools to assist research scholars. These tools are free and developed to help you assist in your journey. Just to help you automate your routine jobs.
Here are a few tools developed till now.
1. For bulk plotting of GROMACS XVG files https://github.com/TheBiomics/GMXvg
2. Python Functions to Process Files and Handle Data https://github.com/TheBiomics/UtilityLib
3. To convert images like to 600dpi 1200dpi tiff or JPG format etc https://github.com/TheBiomics/bimbmaan
4. Other web based tools at https://bi0.in/tool (sorry for ads)
We would love to solve any such problem where repetitive work is needed. You can share your problem. We will try to solve your problem through code. Additionally, anyone interested can collaborate with us to take these further.
GitHub
GitHub - TheBiomics/GMXvg: Plotting graphs from XVGs generated by GROMACS in Python
Plotting graphs from XVGs generated by GROMACS in Python - TheBiomics/GMXvg
π6
If anyone seeking open source tool to delete, arrange, and/or merge pages in PDF file, PDFArranger tool is highly recommended. It is available for Windows and Linux.
Visit for binaries or installation instructions: https://github.com/pdfarranger/pdfarranger
To download to your PC visit: https://github.com/pdfarranger/pdfarranger/releases/tag/1.10.0
Visit for binaries or installation instructions: https://github.com/pdfarranger/pdfarranger
To download to your PC visit: https://github.com/pdfarranger/pdfarranger/releases/tag/1.10.0
GitHub
GitHub - pdfarranger/pdfarranger: Small python-gtk application, which helps the user to merge or split PDF documents and rotateβ¦
Small python-gtk application, which helps the user to merge or split PDF documents and rotate, crop and rearrange their pages using an interactive and intuitive graphical interface. - pdfarranger/p...
π1
ChatGPT Alternative Tools with Specific Requirements
The article contains tools for the following category and it can be helpful in research writing and analysis.
1. Tools for Article Search and Literature Review
2. Summarization and Abstract Writing Tools
3. Paper Reading and Annotation
4. Scientific Writing Assistance Tools
5. Data Analysis and Visualization Tools
6. Language Translation and Multilingual Writing Tools
7. Article Paraphrasing
8. AI Writing Detection and Plagiarism Check
https://bi0.in/n651
The article contains tools for the following category and it can be helpful in research writing and analysis.
1. Tools for Article Search and Literature Review
2. Summarization and Abstract Writing Tools
3. Paper Reading and Annotation
4. Scientific Writing Assistance Tools
5. Data Analysis and Visualization Tools
6. Language Translation and Multilingual Writing Tools
7. Article Paraphrasing
8. AI Writing Detection and Plagiarism Check
https://bi0.in/n651
The Biomics
Alternatives to ChatGPT: Top 10 AI Writing Tools for Biology
Artificial intelligence (AI) is increasingly being used in biology to automate and simplify image analysis, predict protein structures, drug discovery, and even speed up writing and data analysis. AI can help you boast your performance in your research growth.β¦
β€2π2
Forwarded from Multiple Choice Questions - NET, SET, MSc, PhD (BioQuiz)
What is tautonym?
Anonymous Quiz
33%
These are the repeated sequences
10%
It is a name of fish
53%
Identical name of genus and species
5%
It is a name of the genus
Forwarded from Multiple Choice Questions - NET, SET, MSc, PhD (vi @theBiomics)
What's the difference between hg19 and hg38 assembly?
Human genome assembly is the process of constructing a comprehensive, high-quality map of the complete set of DNA in an individual's cells. But what's the difference between hg19 and hg38?
Learn here https://bi0.in/n647
Human genome assembly is the process of constructing a comprehensive, high-quality map of the complete set of DNA in an individual's cells. But what's the difference between hg19 and hg38?
Learn here https://bi0.in/n647
The Biomics
What's the difference between hg19 and hg38 assembly?
Human genome assembly is the process of constructing a comprehensive, high-quality map of the complete set of DNA in an individual's cells. But what's the difference between hg19 and hg38?
Forwarded from π
TheBiomics - CSIR, GATE, ICMR, DBT, TIFR, GRE, GAT-B, IIT (vi @theBiomics)
10 Discoveries that never received the Nobel Prize
It has been more than 100 years since the first Nobel Prize distribution ceremony...
It has been more than 100 years since the first Nobel Prize distribution ceremony...
The Biomics
The Greatest Discoveries that Never Received a Nobel Prize
The Nobel Prize has never failed to encourage people to work hard in their fields. It is not just an award. It is a symbol that shows that our whole Nation is proud of the work of Nobel Laureates.
Forwarded from Angry Ninja
Researchers developed a novel compound that effectively clears #bacterial infections in mice, including those that can result in rare but potentially fatal β#flesheatingβ illnesses. The potential drug could be the first of an entirely new class of #antibiotics against #antibioticresistant staph and strep infections.
(#Science Advances, 2 Aug 2024)
PMID: 38260261
(#Science Advances, 2 Aug 2024)
PMID: 38260261
PubMed
Dihydrothiazolo ring-fused 2-pyridone antimicrobial compounds treat Streptococcus pyogenes skin and soft tissue infection - PubMed
We have developed GmPcides from a peptidomimetic dihydrothiazolo ring-fused 2-pyridone scaffold that have antimicrobial activities against a broad-spectrum of Gram-positive pathogens. Here we examine the treatment efficacy of GmPcides using skin and softβ¦
π1
Forwarded from π
TheBiomics - CSIR, GATE, ICMR, DBT, TIFR, GRE, GAT-B, IIT (scientific reporter)
Media is too big
VIEW IN TELEGRAM
Forwarded from π
TheBiomics - CSIR, GATE, ICMR, DBT, TIFR, GRE, GAT-B, IIT (scientific reporter)
β€2
Forwarded from π
TheBiomics - CSIR, GATE, ICMR, DBT, TIFR, GRE, GAT-B, IIT (vi @theBiomics)