Statistical strategies for microRNAseq batch effect reduction
چکیده
RNAseq technology is replacing microarray technology as the tool of choice for gene expression profiling. While providing much richer data than microarray, analysis of RNAseq data has been much more challenging. Among the many difficulties of RNAseq analysis, correctly adjusting for batch effect is a pivotal one for large-scale RNAseq based studies. The batch effect of RNAseq data is most obvious in microRNA (miRNA) sequencing studies. Using real miRNA sequencing (miRNAseq) data, we evaluated several batch
removal techniques and discussed their effectiveness. We illustrate that by adjusting for batch effect, more reliable differentially expressed genes can be identified. Our study on batch effect in miRNAseq data can serve as a guideline for future miRNAseq studies that might contain batch effect

Statistical strategies for microRNAseq batch effect reduction

آشنایی با تکنیک های مختلف بلاتینگ برای مطالعه DNA، پروتئین و RNA

From Membrane Composition to Antimicrobial Strategies: Experimental and Computational Approaches to AMP Design and Selectivity

From Membrane Composition to Antimicrobial Strategies: Experimental and Computational Approaches to AMP Design and Selectivity

یکی از بهترین بسته های R برای انالیز همزمان چند نوع داده بدست امده از خروجی های امیکسی همین بسته iModMix هستش واقعا عالیه حتما امتحانش کنین حرف نداره برای ایجاد خروجی های گرافیکی عالی و همچنین مقایسه داده های امیکسی مختلف با هم . در فایل های پیوست ورودی های این ابزار هم براتون گذاشتیم تا باهاش کار کنین و یاد بگیرین. نسخه انلاینشم لینکش هست فقط یادتون باشه تو Rstudio ورژن اخر باید رانش کنین
https://github.com/biodatalab/iModMix

https://imodmix.moffitt.org/

https://pmc.ncbi.nlm.nih.gov/articles/PMC11601443/

Agrobacterium-Mediated Gene Transfer (Transformation) in Plants.